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S6 - PNAS

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					          Table S6. Subnetwork Enriched by
Network
   ID
    1
    2

   3
   4
   5
   6
   7
   8

   9

   10
   11
   12
   13
   14
   15
   16
   17
   18
                                                      Table S6. Subnetwork Enriched by Ingen
                                         Enriched Ingeuity Network

 Cell Cycle, Cellular Assembly and Organization, Cellular Function and Maintenance
 Cellular Movement, Connective Tissue Development and Function, Renal and Urological System Development
and Function
 Cell Morphology, Cellular Function and Maintenance, DNA Replication, Recombination, and Repair
 Gene Expression, Protein Synthesis, Cell Morphology
 DNA Replication, Recombination, and Repair, Cellular Compromise, Hematological System Development and
 Cell Morphology, Genetic Disorder, Metabolic Disease
 Cellular Assembly and Organization, Cancer, Antigen Presentation
 Auditory and Vestibular System Development and Function, Nervous System Development and Function,
Cardiovascular Disease
 Cell-To-Cell Signaling and Interaction, Cellular Growth and Proliferation, Hematological System Development
and Function
 Cellular Assembly and Organization, Cellular Function and Maintenance, Amino Acid Metabolism
 Cellular Assembly and Organization, Cellular Compromise, Genetic Disorder
 Gene Expression, Hematological System Development and Function, Hematopoiesis
 Cell Cycle, Cancer, Neurological Disease
 Cardiovascular System Development and Function, Organismal Development, Tissue Morphology
 Amino Acid Metabolism, Post-Translational Modification, Small Molecule Biochemistry

Cell Cycle, Digestive System Development and Function, Gastrointestinal Disease
Genetic Disorder, Metabolic Disease, Cellular Development
iched by Ingenuity Network Analysis
                                      Molecules in Network                                  Score

                                                                                       33
       ABLIM1, AKAP13, Alpha Actinin, Alpha catenin, ATYPICAL PROTEIN KINASE C, Cadherin, Calpain, CTNND1, CXADR, DHC

                                                                                                 32
       14-3-3, Alcohol group acceptor phosphotransferase, Alpha tubulin, ARAF, ARHGAP17, ARHGEF7, ARHGEF11, ARHGEF6/7,
                                                                                                 30
        ACIN1, AKT1, BRIP1, Calcineurin protein(s), Caspase, Cytochrome c, Growth hormone, HDL, HSF1, Hsp27, Hsp70, Hsp90, I
                                                                                                 29
        ADD1, Akt, AKT1S1, ATP2B1, CARHSP1, CDC2, Cdc2, Creb, Cyclin B, Cyclin D, Cyclin E, E2f, EIF4B, FLNA, Gsk3, GSK3A,
                                                                                                 25
        APH1A (includes EG:51107), ARL1, BAT2, BRIP1, C17ORF59, C20ORF111, C2ORF49, C6ORF134, DOCK7 (includes EG:85
                                                                                                 21
        Beta ark, CaMKII, CFL1, Cofilin, Glycogen synthase, Ikk (family), ITPR, ITPR3, Jnkk, Limk, MAP2K4/7, MAP3K, MAP3K2, MA
        ABL2, AGFG1 (includes EG:3267), Arp2/3, CBL, CD3, CRK/CRKL, Csf2ra-Csf2rb, Dynein,18      EPB41L2, EPS15L1, ERK, EVL, F

                                                                                    18
       ABCA2, Actin, AFG3L1, AFG3L2, ATP8, ATP11B, ATP13A2, ATP13A5, ATP5S, ATPase, Calmodulin, CD2BP2, Ck2, DDX3Y

                                                                                              18
       ADAMTS3, AGT, Anti-inflammatory Cytokine, AP3D1, ATXN1, BBX, CASP6, CIAPIN1, CIC, COL4A6, DIDO1, DMWD, DNAS
                                                                                              17
       ANXA2, ATG16L1, C14ORF4, C14ORF133, C14ORF166, C18ORF25, CDC42EP2, CEP170, CEP290, DISC1, EIF1B, ESYT1
       ADD3, BAT2D1, CCDC132, CLASP1, CLASP2, DNAJC4, DNAJC11, DNAJC21, DOCK11,17              HOXA9, HTT, KIF21A, KIF2A, MA
       AFF4, AKAP2, AR, AUH, CCNF, CD40LG, CDK7, CDK9, DCTPP1, EID1, FKHR, HECW2,16            HIST4H4 (includes EG:121504), hy
                                                                                               IFN
       Ap1, CDK2, CDKN1B, Collagen type I, Collagen(s), Cyclin A, Fibrinogen, hCG, Histone h3,13 Beta, IL1, IL12 (complex), Imp
                                                                                              10
       AHNAK, AMPK, BAG3, Caveolin, Endothelin, Estrogen Receptor, Fgf, Focal adhesion kinase, G alpha, G alphai, G protein bet
                                                                                              5
       BCL2, BIK, BIRC5, BNIP1, BTK, CCNYL1, CD24, CD247, CDK6, CDKN2B, CLK4, CSK, CTGF, CX3CL1, EPHB2, GATA1, HM
       FIBP, KIAA0528                                                                         2
       CLN6, STAT3                                                                            2
       MCOLN1, MCOLN3, SLC35E1, TRIM27                                                        2
Focus Molecules

20

20
19
18
16
15
13

13

13
12
12
12
11
8
5
1
1
1

				
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posted:9/25/2011
language:English
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