NRL Field Activities in the Chesapeake Bay and Vicinity

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							         NRL Code 7230 Field Activities
                   in the
         Chesapeake Bay and Vicinity:
                      Summer 2006
                        Timothy F. Donato
                     Naval Research Laboratory
                  Remote Sensing Division, Code 7230
                          Washington, DC




31 January 2006     Chesapeake Bay Remote Sensing Symposium   Timothy F Donato, NRL-DC Code 7230
                               INTRODUCTION
Terrestrial Organic Matter Cycling
      in the Coastal Ocean
               Objectives:
1. To deconvolve Hypersperspectral
   signatures of coastal waters into                                                    PHILLS II Rrs Rappahannock River, Va 01MAR2004

                                                                                     0.004
                                                                                                                   Pk=Gauss+Lor Amp 10 Peaks
                                                                                                              r2=0.999758 SE=1.48617e-05 F=48913.1
                                                                                                                                                                                      0.004



   constituents                                                                     0.0035


                                                                                     0.003
                                                                                                                             572.67
                                                                                                                                                          702.96
                                                                                                                                                                                      0.0035


                                                                                                                                                                                      0.003




2. To     identify  organic    matter                                               0.0025                                                                                            0.0025




                                                                                                                                                                                               % Intensity
                                               BT




                                                                              Rrs
                                                                                     0.002                                            610.49                                          0.002




   constituents of terrestrial origin
                                                                                    0.0015                                                      647.91                                0.0015
                                                                                                                                                                             803.97

                                                                                     0.001                          524.11                                         748.05             0.001




                                                    Chl-a
                                                                                                          482.14
                                                                                    0.0005                                                                                            0.0005



   either directly or through the
                                                                                               436.31

                                                                                        0                                                                                             0
                                                                                        400                   500                     600                  700               800
                                                                                                                                  Wavelength
                                                                                      PHILLS II Rrs Rappahannock River, Va 01MAR2004

   presence of surrogate signatures                      cdom                        0.004
                                                                                                              Pk=Gauss+Lor Amp 9 Peaks
                                                                                                          r2=0.999844 SE=1.29552e-05 F=85037.6
                                                                                                                                                                                      0.004

                                                                                    0.0035                                                                                            0.0035
                                                                                                                              580.42

                                                                                     0.003                                                                                            0.003




             Applications:                                                          0.0025                                                                                            0.0025




                                                                                                                                                                                               % Intensity
                                                                              Rrs
                                                                                                                                                          697.25
                                                                                     0.002                                                                                            0.002
                                                                                                                   516.25                      640.43

                                                                                    0.0015                                                                                            0.0015



1. Earth System Science                                                              0.001


                                                                                    0.0005
                                                                                                 449.05



                                                                                                                                                 651.81             753.47
                                                                                                                                                                             801.95   0.001


                                                                                                                                                                                      0.0005




   – Carbon Cycling
                                                                                         0                                                                                            0
                                                                                         400                  500                     600                  700               800
                                                                                                                                      wavelngth




   – Ecosystem Dynamics
2. Environmental Management                                            Spectral decomposition
         – Water Quality Monitoring                                    leading to identification
         – Habitat Monitoring                    EEI mapping           and quantification of
                                                     and               constituents
                                                 quantification
    31 January 2006          Chesapeake Bay Remote Sensing Symposium   Timothy F Donato, NRL-DC Code 7230
   Field Campaign: 21-30 June & 24 July to 4 August 2006
                     CASI Flights
A. Potomac River ETM            D. Other Ches Bay Areas
B. Virginia Coastal Reserve E. Outer Banks/CAPES                                         F
C. SERC                         F. Delaware River & Bay
                       Objectives                         C
 • Time/Space evolution of ambient spectral
   signatures modified by a tidal environment                                D
 • Spectral variability along a salinity gradient
 • Coastal landscape characterization                   A
 • Temporal analysis
 • Catalog spectra from diverse environments                                         B
 • Observations of Rural, urban, and industrial
   waterways

                        NOAA TWIN OTTER

                                                                                 E


                                                                         E
  31 January 2006       Chesapeake Bay Remote Sensing Symposium   Timothy F Donato, NRL-DC Code 7230
                        Instrumentation


                                                            40.5 degrees across-
                           Field of View
                                                            track over 1490 pixels
                                                            650nm between 400
                           Spectral Range
                                                            and 1050nm
                                                            288 at 2.2nm intervals
                           Spectral Samples
                                                            (2.5 nominal)
                           Aperture                          F/3.5 to F/18.0
                           Dynamic Range                    16384:1 (14 bits)
                           Noise Floor                       3.0 DN
                           Signal to Noise Ratio             800:1 Peak
                           Data Throughput                  5 Mega pixel/sec




31 January 2006   Chesapeake Bay Remote Sensing Symposium     Timothy F Donato, NRL-DC Code 7230
                         Ground Truth Acquisitions
                     In water Optics Package
                     – ac-9 absorption & attenuation;
                          CDOM absorption at 9 λ
                     – ECO-VSF3 Backscattering at
                             3∟and 3 λ
                     – WetStar: Stimulated Chl
                             Fluorescence
                     – SBE-49 CTD

                                                         Rrs: 350 - 1050 nm 1.4 nm spacing

                                                                     Water Quality
                                                           Temp., DO, Cond., pH
                                                           Depth/Vented Level
MICROTOPS II 5-channel                                     Turbidity: Self-Cleaning
     hand-held ozonometer                                  Chlorophyll a
– total column ozone.                                      Blue-Green Algae
                                                           Li-Cor Ambient Light
– total H20 vapor at 936 nm
– aerosol optical thickness
     at 1020 nm.
   31 January 2006         Chesapeake Bay Remote Sensing Symposium     Timothy F Donato, NRL-DC Code 7230
  Tentative CASI Collections for Lower Bay & Tributaries

                      SERC

   Tidal Potomac
   Fresh/ ETM          Pax River




                      Lower
                      Potomac River



                  Rapp River
                                      Lower
                                      Bay

                       York
                       River


                                                   VCR




31 January 2006                Chesapeake Bay Remote Sensing Symposium   Timothy F Donato, NRL-DC Code 7230
Tentative Collections for Upper Chesapeake Bay & Delaware Bay



                                                     Delaware River




                              Upper Bay
                                                           Delaware Bay




                            Mid
                            Bay




   31 January 2006   Chesapeake Bay Remote Sensing Symposium    Timothy F Donato, NRL-DC Code 7230
             Tentative CASI Collections for the CAPES




31 January 2006      Chesapeake Bay Remote Sensing Symposium   Timothy F Donato, NRL-DC Code 7230
PHILLS Collections for Potomac ETM: 11 July 2005 14:05 UTC
                    Microcystis Bloom near Confluence
                          of Port Tobacco River




  31 January 2006      Chesapeake Bay Remote Sensing Symposium   Timothy F Donato, NRL-DC Code 7230
     LUT for Constituent Identification and Quantification
    A spectrum-matching and Look-Up-Table techniques
appears to be an attractive method for identifying and
quantifying     constituents   in  HSI    from    aquatic
environments.
Based on C. Mobely’s radiative transfer model Hydrolight
• Work is in its infancy but shows promising results
  for non-case 1 waters
• Requires material absorption and scattering
  coefficients for simulation
• Currently absorption coefficients available for
  water, cdom, chl-a, some generalized sediments
  and bottom types.
• Need additional mineral IOP’s
• Need better execution scheme—can’t compute LUT example using hand-held
  spectral for every know component occurring in spectra collected from Indian
  natural waters.                                     River Lagoon, FL
• Simulation and Development of environmental
  indicator microbes—Couple with ecological Model

31 January 2006      Chesapeake Bay Remote Sensing Symposium   Timothy F Donato, NRL-DC Code 7230
                                  Remarks


    • Last year of a 3 year effort
    • Believe their is an opportunity for future collaborative work
                  –NRL has sensors
                  –NOAA has aircraft
                  –Require modest funding for continued monitoring
                  –Leverage Labor Resources (Analysis & Dist)
    • Need synergy with in situ data collection schemes




31 January 2006       Chesapeake Bay Remote Sensing Symposium   Timothy F Donato, NRL-DC Code 7230
              Hydrodynamic, Ecological & Optical Modeling
MIKE-3 A 3-D time dependent finite-difference modeling
system designed to simulate a variety of physical,
sediment transport and water quality processes in
estuaries and coastal oceans. Two versions:
         MIKE-3 HD Nonhydrostatic Finite difference
         MIKE-3 FM Hydrostatic Finite Volume

ECO Lab is a numerical lab for ecological modeling in
aquatic environments and has been developed to
describe chemical, biological, ecological processes and
interactions between state variables. State variables
included in ECO Lab can either be transported by
advection-dispersion processes or have a more fixed
nature. ECO Lab is coupled with MIKE-3
HYDROLIGHT is a radiative transfer numerical model
computes radiance distributions and related quantities
(irradiance, reflectance, diffuse attenuation functions,
etc.) in the ocean. Given a prediction of water
absorption and scattering properties, HYDROLIGHT can
be used to predict the corresponding light field.
   31 January 2006       Chesapeake Bay Remote Sensing Symposium   Timothy F Donato, NRL-DC Code 7230

						
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