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Supplementary Table 2 - Excel

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Supplementary Table 2 - Excel Powered By Docstoc
					                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               Supplementary Table 2




                                   Pro te i n N a m e                                      Ge n e N a m e Mo l e cu l a r We i g h t # U n i q u e Pe p ti d e s    Fi rst IPI   Al l IPIs
A1BG Alpha-1B-glycoprotein precursor                                                       A1BG                     54254.4                        2               IPI00022895   IPI00022895,   IPI00745089
A2M Alpha-2-macroglobulin precursor                                                        A2M                      163259                        44               IPI00478003   IPI00478003
ABCA12 Isoform 1 of ATP-binding cassette sub-family A member 12                            ABCA12                   293244                         2               IPI00782981   IPI00782981
ACE Isoform Somatic-1 of Angiotensin-converting enzyme, somatic isoform precursor          ACE                      149701                         7               IPI00437751   IPI00437751,   IPI00877100
ACTB Actin, cytoplasmic 1                                                                  ACTB                     41719.8                        1               IPI00021439   IPI00021439,   IPI00021440, IPI00894498
ACTN1 Alpha-actinin-1                                                                      ACTN1                    103043                         1               IPI00013508   IPI00013508,   IPI00013808, IPI00759776
AFM Afamin precursor                                                                       AFM                      69052.1                        2               IPI00019943   IPI00019943
AGA N                                                                                      AGA                      37176.4                        2               IPI00026259   IPI00026259
AGRN Agrin precursor                                                                       AGRN                     214820                         2               IPI00374563   IPI00374563
AGT Angiotensinogen precursor                                                              AGT                      53136.8                        1               IPI00032220   IPI00032220
AHSG Alpha-2-HS-glycoprotein precursor                                                     AHSG                     39305.4                        1               IPI00022431   IPI00022431,   IPI00795830
ALB Isoform 1 of Serum albumin precursor                                                   ALB                      69348.9                       56               IPI00745872   IPI00745872
ALB Uncharacterized protein ALB                                                            ALB                      71686.8                        1               IPI00022434   IPI00022434
AMBP AMBP protein precursor                                                                AMBP                     38981.5                        4               IPI00022426   IPI00022426
ANPEP Aminopeptidase N                                                                     ANPEP                    109524                        28               IPI00221224   IPI00221224
APCS Serum amyloid P-component precursor                                                   APCS                     25369.7                        6               IPI00022391   IPI00022391
APOA1 Apolipoprotein A-I precursor                                                         APOA1                    30760.5                       11               IPI00021841   IPI00021841
APOA2 Apolipoprotein A-II precursor                                                        APOA2                    11157.2                        2               IPI00021854   IPI00021854
APOB APOB protein                                                                          APOB                     92605.4                        1               IPI00894122   IPI00894122
APOB Apolipoprotein B-100 precursor                                                        APOB                     515554                        28               IPI00022229   IPI00022229
APOC1 Apolipoprotein C-I precursor                                                         APOC1                     9314.3                        1               IPI00021855   IPI00021855
APOD Apolipoprotein D precursor                                                            APOD                      21258                        16               IPI00006662   IPI00006662
APOE Apolipoprotein E precursor                                                            APOE                     36135.5                        3               IPI00021842   IPI00021842
APOH Beta-2-glycoprotein 1 precursor                                                       APOH                     38280.5                       10               IPI00298828   IPI00298828
APP Isoform APP770 of Amyloid beta A4 protein precursor (Fragment)                         APP                      86923.3                        3               IPI00006608   IPI00006608,   IPI00219187, IPI00412681, IPI00412924
ASAH1 Acid ceramidase precursor                                                            ASAH1                    44633.1                        8               IPI00013698   IPI00013698
ATRN Isoform 1 of Attractin precursor                                                      ATRN                     158518                        12               IPI00027235   IPI00027235,   IPI00162735, IPI00218460
AZGP1 alpha-2-glycoprotein 1, zinc                                                         AZGP1                    34240.6                       23               IPI00166729   IPI00166729
BTN3A3 Butyrophilin subfamily 3 member A3 precursor                                        BTN3A3                   64985.4                        1               IPI00012977   IPI00012977,   IPI00013210, IPI00219527, IPI00292487, IPI00377135, IPI00383474, IPI00384734, IPI00790663, IPI00843976
C3 Complement C3 precursor (Fragment)                                                      C3                       187131                        57               IPI00783987   IPI00783987
C4A Complement component 4A                                                                C4A                      192726                         1               IPI00643525   IPI00643525,   IPI00843913
C4A complement component 4A preproprotein                                                  C4A                      192769                        49               IPI00889723   IPI00889723
C4B complement component 4B preproprotein                                                  C4B                      192735                         1               IPI00418163   IPI00418163,   IPI00887154, IPI00892604
C4BPA C4b-binding protein alpha chain precursor                                            C4BPA                     67015                         7               IPI00021727   IPI00021727
C5 Complement C5 precursor                                                                 C5                       188291                         1               IPI00032291   IPI00032291,   IPI00816741
C8A Complement component C8 alpha chain precursor                                          C8A                      65145.8                        1               IPI00011252   IPI00011252
C9 Complement component C9 precursor                                                       C9                       63156.8                        7               IPI00022395   IPI00022395
CALM2;CALM1;CALM3 Calmodulin                                                               CALM                      16820                         1               IPI00075248   IPI00075248,   IPI00386621, IPI00794543
CD109 Isoform 1 of CD109 antigen precursor                                                 CD109                    161674                         3               IPI00152540   IPI00152540,   IPI00795327, IPI00795801
CD55 Decay-accelerating factor splicing variant 4                                          CD55                     56199.4                        1               IPI00152418   IPI00152418,   IPI00216550, IPI00292069, IPI00382926, IPI00647119, IPI00783145, IPI00784169, IPI00874177
CD59 CD59 glycoprotein precursor                                                           CD59                     14159.2                        3               IPI00011302   IPI00011302
CD5L CD5 antigen-like precursor                                                            CD5L                     38067.9                        3               IPI00025204   IPI00025204
CDH1 Epithelial cadherin precursor                                                         CDH1                     97439.6                        2               IPI00025861   IPI00025861,   IPI00744889
CEACAM1 Isoform A of Carcinoembryonic antigen-related cell adhesion molecule 1 precursor   CEACAM1                  57542.3                        1               IPI00009938   IPI00009938,   IPI00012676, IPI00013972, IPI00018920, IPI00027486, IPI00216039, IPI00328130, IPI00385428, IPI00437847, IPI00641900, IPI00644390, IPI00783432, IPI00879975, IPI00880101
CEL carboxyl ester lipase precursor                                                        CEL                      79649.6                        3               IPI00099670   IPI00099670,   IPI00843810
CFB Isoform 1 of Complement factor B precursor (Fragment)                                  CFB                      85515.2                       13               IPI00019591   IPI00019591
CFH Isoform 1 of Complement factor H precursor                                             CFH                      139078                        12               IPI00029739   IPI00029739
CFHR1 Complement factor H-related protein 1 precursor                                      CFHR1                    37643.3                        2               IPI00011264   IPI00011264
CFI Complement factor I precursor                                                          CFI                      65701.8                        2               IPI00291867   IPI00291867,   IPI00795153, IPI00796990, IPI00872555
CHI3L1 Chitinase-3-like protein 1 precursor                                                CHI3L1                    42609                         2               IPI00002147   IPI00002147
CIB1 Calcium and integrin-binding protein 1                                                CIB1                     21686.6                        1               IPI00018451   IPI00018451
CLU Clusterin precursor                                                                    CLU                      52476.9                       10               IPI00291262   IPI00291262,   IPI00400826, IPI00795633
CP Ceruloplasmin precursor                                                                 CP                       122190                        20               IPI00017601   IPI00017601
CSF1 Isoform 1 of Macrophage colony-stimulating factor 1 precursor                         CSF1                     60101.4                        4               IPI00015881   IPI00015881,   IPI00218201, IPI00218202, IPI00556665
CSN1S1 Isoform 2 of Alpha-S1-casein precursor                                              CSN1S1                   21525.4                        1               IPI00216119   IPI00216119,   IPI00328198
CUTA Isoform A of Protein CutA precursor                                                   CUTA                     20906.9                        2               IPI00034319   IPI00034319,   IPI00554556, IPI00554634
CYCS Cytochrome c                                                                          CYCS                     11731.4                        3               IPI00465315   IPI00465315
DCD Dermcidin precursor                                                                    DCD                      11266.1                        1               IPI00027547   IPI00027547,   IPI00847793
DEFA1;LOC728358 Neutrophil defensin 1 precursor                                            DEFA1                     10183                         3               IPI00005721   IPI00005721,   IPI00021827
DMBT1 Isoform 1 of Deleted in malignant brain tumors 1 protein precursor                   DMBT1                    260708                         1               IPI00099110   IPI00099110,   IPI00412044, IPI00413835, IPI00418512, IPI00478115, IPI00553058, IPI00642761, IPI00647000, IPI00658218, IPI00745701, IPI00871206, IPI00871790, IPI00872278, IPI00873417, IPI00873627, IPI00886961
EGF Pro-epidermal growth factor precursor                                                  EGF                      133928                         1               IPI00000073   IPI00000073
F12 Coagulation factor XII precursor                                                       F12                      67798.7                        1               IPI00019581   IPI00019581
F2 Prothrombin precursor (Fragment)                                                        F2                       70018.8                        6               IPI00019568   IPI00019568
FCGBP IgGFc-binding protein precursor                                                      FCGBP                    572016                        10               IPI00242956   IPI00242956
FCGR3A Low affinity immunoglobulin gamma Fc region receptor III-A precursor                FCGR3A                   29071.6                        1               IPI00218834   IPI00218834,   IPI00640044, IPI00738873, IPI00853300, IPI00853533, IPI00888509, IPI00895917
FGA Isoform 1 of Fibrinogen alpha chain precursor                                          FGA                      94955.4                        7               IPI00021885   IPI00021885,   IPI00029717, IPI00871469
FGB Fibrinogen beta chain precursor                                                        FGB                      55910.6                       11               IPI00298497   IPI00298497
FGG Isoform Gamma-B of Fibrinogen gamma chain precursor                                    FGG                      51495.3                       11               IPI00021891   IPI00021891,   IPI00219713, IPI00877703, IPI00877792
FN1 Isoform 1 of Fibronectin precursor                                                     FN1                      262581                        13               IPI00022418   IPI00022418,   IPI00339223, IPI00339225, IPI00339226, IPI00339227, IPI00339228, IPI00414283, IPI00479723, IPI00845263, IPI00855777, IPI00855785, IPI00867588
FOLR1 Folate receptor alpha precursor                                                      FOLR1                    29800.5                        1               IPI00441498   IPI00441498
FTH1 Ferritin heavy chain                                                                  FTH1                     21208.2                        3               IPI00554521   IPI00554521
FTL Ferritin light chain                                                                   FTL                      20002.6                        5               IPI00738499   IPI00738499
FZD2 Frizzled-2 precursor                                                                  FZD2                      63537                         1               IPI00016027   IPI00016027,   IPI00024012
GC Vitamin D-binding protein precursor                                                     GC                       52946.6                        7               IPI00555812   IPI00555812
GGT1 Isoform 1 of Gamma-glutamyltranspeptidase 1 precursor                                 GGT1                     61392.6                        5               IPI00018901   IPI00018901
GP2 zymogen granule membrane glycoprotein 2 isoform 2                                      GP2                      59109.1                        7               IPI00470823   IPI00470823
GPNMB Isoform 2 of Transmembrane glycoprotein NMB precursor                                GPNMB                    62625.2                        1               IPI00001592   IPI00001592,   IPI00470529
GPRC5B G-protein coupled receptor family C group 5 member B precursor                      GPRC5B                   44778.2                        1               IPI00008239   IPI00008239
GRN cDNA FLJ13286 fis, clone OVARC1001154                                                  GRN                      44111.3                        1               IPI00181753   IPI00181753,   IPI00296713
GSN Isoform 1 of Gelsolin precursor                                                        GSN                      85679.8                        1               IPI00026314   IPI00026314,   IPI00377087, IPI00513782, IPI00646773, IPI00647556, IPI00796316
GUSB Isoform Long of Beta-glucuronidase precursor                                          GUSB                     74714.7                        7               IPI00027745   IPI00027745
HBA2;HBA1 Hemoglobin subunit alpha                                                         HBA                      15239.6                        3               IPI00410714   IPI00410714,   IPI00853068
HBE1 Hemoglobin subunit epsilon                                                            HBE1                      16185                         1               IPI00217471   IPI00217471,   IPI00220706, IPI00473011, IPI00554676, IPI00654755, IPI00657660, IPI00657911, IPI00744503, IPI00749035, IPI00791558, IPI00796636, IPI00815947, IPI00816618, IPI00829896, IPI00830113, IPI00853641, IPI00884107, IPI00884436
HP Haptoglobin precursor                                                                   HP                       46704.7                       21               IPI00641737   IPI00641737
HPX Hemopexin precursor                                                                    HPX                      51658.5                       13               IPI00022488   IPI00022488
HRG Histidine-rich glycoprotein precursor                                                  HRG                      59558.6                       10               IPI00022371   IPI00022371
HRNR Hornerin                                                                              HRNR                     282355                         1               IPI00398625   IPI00398625,   IPI00787362, IPI00887022
ICAM1 Intercellular adhesion molecule 1 precursor                                          ICAM1                    57806.5                        1               IPI00008494   IPI00008494,   IPI00642425
IGH@ IGH@ protein                                                                          IGH@                     51978.6                        1               IPI00785067   IPI00785067
IGHD Isoform 2 of Ig delta chain C region                                                  IGHD                     47382.5                        2               IPI00163446   IPI00163446,   IPI00829636, IPI00893578
IGHG1 IGHG1 protein                                                                        IGHG1                    60083.4                        2               IPI00448925   IPI00448925
IGHG1 Putative uncharacterized protein DKFZp686P15220                                      IGHG1                    51705.9                       16               IPI00645363   IPI00645363
IGHG2 Putative uncharacterized protein DKFZp686I04196 (Fragment)                           IGHG2                    46041.4                        7               IPI00399007   IPI00399007
IGHG4 IGHG4 protein                                                                        IGHG4                    51967.3                        2               IPI00550640   IPI00550640,   IPI00829814
IGHM FLJ00385 protein (Fragment)                                                           IGHM                     56092.1                        2               IPI00168728   IPI00168728,   IPI00418153, IPI00472345, IPI00784894, IPI00827754, IPI00829716, IPI00829850, IPI00829940
IGHM IGHM protein                                                                          IGHM                     52647.5                        3               IPI00472610   IPI00472610
IGHM IGHM protein                                                                          IGHM                     66165.7                       11               IPI00549291   IPI00549291
IGHM IGHM protein                                                                          IGHM                     67276.8                        1               IPI00477090   IPI00477090
IGHV1OR15-1 Ig heavy chain V-I region V35 precursor                                        IGHV1OR15-1              12990.5                        1               IPI00009792   IPI00009792
IGHV3OR16-13;IGHA1 cDNA FLJ41552 fis, clone COLON2004478                                   IGHV3OR16-13             53302.6                        1               IPI00647704   IPI00647704
IGHV3OR16-13;IGHA1 IGHA1 protein                                                           IGHV3OR16-13             52846.1                        1               IPI00430842   IPI00430842
IGHV3OR16-13;IGHA1 IGHA1 protein                                                           IGHV3OR16-13             53357.4                       19               IPI00166866   IPI00166866
IGHV3OR16-13;IGHA1 IGHA1 protein                                                           IGHV3OR16-13             53372.9                        2               IPI00744561   IPI00744561
IGHV3OR16-13;IGHA1 IGHA1 protein                                                           IGHV3OR16-13             54134.9                        1               IPI00061977   IPI00061977
IGHV3OR16-13;IGHA1 Putative uncharacterized protein DKFZp686K18196 (Fragment)              IGHV3OR16-13              56405                         1               IPI00423462   IPI00423462
IGHV4-31 Immunoglobulin heavy variable 4-31                                                IGHV4-31                 52267.7                        2               IPI00785084   IPI00785084
IGHV4-31 Putative uncharacterized protein DKFZp686G11190                                   IGHV4-31                 52024.1                        2               IPI00784842   IPI00784842
IGJ immunoglobulin J chain                                                                 IGJ                      18080.5                        8               IPI00178926   IPI00178926
IGK@ IGK@ protein                                                                          IGK@                     25755.1                        1               IPI00784865   IPI00784865
IGKC IGKC protein                                                                          IGKC                     25371.9                        1               IPI00845354   IPI00845354
IGKC IGKC protein                                                                          IGKC                      25585                        10               IPI00746963   IPI00746963
IGKC IGKC protein                                                                          IGKC                     25918.4                        1               IPI00472961   IPI00472961
IGKV1-5 IGKV1-5 protein                                                                    IGKV1-5                  26216.6                        1               IPI00419424   IPI00419424,   IPI00430808, IPI00550731
IGKV2-24 IGKV2-24 protein                                                                  IGKV2-24                 26227.7                        1               IPI00440577   IPI00440577
IGKV3-20 IGK@ protein                                                                      IGKV3-20                 25816.3                        1               IPI00889156   IPI00889156
IGKV3-20 Myosin-reactive immunoglobulin light chain variable region (Fragment)             IGKV3-20                 11628.3                        2               IPI00885193   IPI00885193
IGKV3D-11 Similar to Ig kappa chain V-III region VG precursor                              IGKV3D-11                12654.8                        2               IPI00784430   IPI00784430
IGKV4-1 Similar to Ig kappa chain V-IV region precursor                                    IGKV4-1                  19500.4                        1               IPI00026197   IPI00026197,   IPI00386132
IGL@ IGL@ protein                                                                          IGL@                     24773.9                        6               IPI00154742   IPI00154742,   IPI00785050
IGL@ IGL@ protein                                                                          IGL@                     24776.5                        1               IPI00829877   IPI00829877
IGL@ IGL@ protein                                                                          IGL@                     24942.4                        1               IPI00829626   IPI00829626
ITIH1 Inter-alpha-trypsin inhibitor heavy chain H1 precursor                               ITIH1                    101372                         1               IPI00292530   IPI00292530
ITIH4 Isoform 2 of Inter-alpha-trypsin inhibitor heavy chain H4 precursor                  ITIH4                    101192                         4               IPI00218192   IPI00218192,   IPI00294193, IPI00896413, IPI00896419
KNG1 Isoform HMW of Kininogen-1 precursor                                                  KNG1                     71939.6                        3               IPI00032328   IPI00032328,   IPI00215894, IPI00797833
KRT1 Keratin, type II cytoskeletal 1                                                       KRT1                     66001.2                       20               IPI00220327   IPI00220327
KRT10 Keratin, type I cytoskeletal 10                                                      KRT10                    59494.3                        7               IPI00009865   IPI00009865
KRT14 Keratin, type I cytoskeletal 14                                                      KRT14                    51604.6                        4               IPI00384444   IPI00384444
KRT16 Keratin, type I cytoskeletal 16                                                      KRT16                     51251                        15               IPI00217963   IPI00217963
KRT17 Keratin, type I cytoskeletal 17                                                      KRT17                    48088.7                        1               IPI00450768   IPI00450768
KRT2 Keratin, type II cytoskeletal 2 epidermal                                             KRT2                     65848.4                        5               IPI00021304   IPI00021304
KRT5 Keratin, type II cytoskeletal 5                                                       KRT5                     62361.6                        2               IPI00009867   IPI00009867
KRT6A Keratin, type II cytoskeletal 6A                                                     KRT6A                    60028.4                       12               IPI00300725   IPI00300725
KRT7 Keratin, type II cytoskeletal 7                                                       KRT7                     51401.4                        1               IPI00306959   IPI00306959,   IPI00847342
KRT9 Keratin, type I cytoskeletal 9                                                        KRT9                      62113                        14               IPI00019359   IPI00019359
LALBA Alpha-lactalbumin precursor                                                          LALBA                    16207.9                        2               IPI00019524   IPI00019524
LAMP1 lysosomal-associated membrane protein 1                                              LAMP1                    44865.1                        1               IPI00004503   IPI00004503,   IPI00556655, IPI00884105
LAMP2 Isoform LAMP-2A of Lysosome-associated membrane glycoprotein 2 precursor             LAMP2                    44942.9                        1               IPI00009030   IPI00009030,   IPI00216172, IPI00739827
LCN2 Neutrophil gelatinase-associated lipocalin precursor                                  LCN2                     22570.9                        6               IPI00299547   IPI00299547
LCP1 Plastin-2                                                                             LCP1                     70274.1                        2               IPI00010471   IPI00010471,   IPI00646259
LGALS3BP Galectin-3-binding protein precursor                                              LGALS3BP                 65314.1                       11               IPI00023673   IPI00023673
LOC100126583 cDNA FLJ41981 fis, clone SMINT2011888                                         n/a                      52855.6                        6               IPI00784830   IPI00784830
LOC100126583 Putative uncharacterized protein                                              n/a                      51838.1                        1               IPI00784969   IPI00784969
LOC100133511 hypothetical protein, partial                                                 n/a                      144792                         2               IPI00887739   IPI00887739
LOC440786 Ig kappa chain V-II region TEW                                                   n/a                      12297.3                        1               IPI00736885   IPI00736885,   IPI00827773
LOC642131 similar to hCG1812074                                                            n/a                      37115.7                        1               IPI00887113   IPI00887113,   IPI00887332
LOC652113 Immunglobulin heavy chain variable region (Fragment)                             n/a                      14317.9                        2               IPI00745363   IPI00745363,   IPI00854743
LOC652128 Uncharacterized protein ENSP00000375038                                          n/a                      12918.1                        1               IPI00328493   IPI00328493,   IPI00383953, IPI00385059, IPI00829753, IPI00829811, IPI00830007, IPI00884081, IPI00893210
LRG1 Leucine-rich alpha-2-glycoprotein precursor                                           LRG1                     38161.7                        2               IPI00022417   IPI00022417
LRP2 Low-density lipoprotein receptor-related protein 2 precursor                          LRP2                     521925                         1               IPI00024292   IPI00024292
LTF Lactotransferrin precursor                                                             LTF                      78164.3                       57               IPI00848342   IPI00848342
LYN Isoform LYN A of Tyrosine-protein kinase Lyn                                           LYN                      58558.3                        1               IPI00298625   IPI00298625,   IPI00432416, IPI00797424, IPI00872474
LYPD3 Ly6/PLAUR domain-containing protein 3 precursor                                      LYPD3                    35951.7                        5               IPI00004310   IPI00004310
LYZ Lysozyme C precursor                                                                   LYZ                      16518.9                        4               IPI00019038   IPI00019038
MFGE8 Lactadherin precursor                                                                MFGE8                    43104.9                        1               IPI00002236   IPI00002236,   IPI00334005
MPO Isoform H17 of Myeloperoxidase precursor                                               MPO                      83853.1                        5               IPI00007244   IPI00007244,   IPI00236554, IPI00236556
MSN Moesin                                                                                 MSN                      67803.8                        1               IPI00219365   IPI00219365,   IPI00872814
MUC1 Isoform 1 of Mucin-1 precursor                                                        MUC1                     122050                         4               IPI00013955   IPI00013955,   IPI00218163, IPI00218164, IPI00218165, IPI00218169, IPI00385173, IPI00607569, IPI00607673, IPI00889553
MUC16 Mucin-16                                                                             MUC16                   2.35E+06                       14               IPI00103552   IPI00103552
MUC4 Isoform 12 of Mucin-4 precursor                                                       MUC4                     125152                         1               IPI00178316   IPI00178316,   IPI00302162, IPI00302258, IPI00789644, IPI00790855, IPI00827758, IPI00827995, IPI00893837
MUC5B mucin 5, subtype B, tracheobronchial                                                 MUC5B                    596653                         5               IPI00855918   IPI00855918,   IPI00886990
MUC6 mucin 6, gastric                                                                      MUC6                     257023                         2               IPI00401776   IPI00401776
MUCL1 Mucin-like protein 1 precursor                                                       MUCL1                     9021.3                        1               IPI00061116   IPI00061116,   IPI00883990
 Amyloid lambda 6 light chain variable region SAR (Fragment)                               n/a                      12276.6                        2               IPI00386839   IPI00386839
Anti-HER3 scFv (Fragment)                                                                  n/a                      26007.4                        1               IPI00884092   IPI00884092
 Anti-mucin1 heavy chain variable region (Fragment)                                        n/a                      13890.2                        1               IPI00828061   IPI00828061,   IPI00829806
 Cryocrystalglobulin CA1 heavy chain variable region (Fragment)                            n/a                      13174.6                        1               IPI00890754   IPI00890754
Cryocrystalglobulin CA2 lambda light chain variable region (Fragment)                      n/a                      11296.7                        2               IPI00890733   IPI00890733
 heavy chain variable region (Fragment)                                                    n/a                      13815.3                        1               IPI00827589   IPI00827589,   IPI00828153
 Ig heavy chain V-I region WOL                                                             n/a                      13665.9                        1               IPI00382471   IPI00382471
 Ig heavy chain V-II region WAH                                                            n/a                      14099.1                        1               IPI00382539   IPI00382539
 Ig heavy chain V-III region BUT                                                           n/a                      12358.8                        1               IPI00382481   IPI00382481
 Ig heavy chain V-III region GAL                                                           n/a                      12708.1                        1               IPI00382500   IPI00382500
 Ig heavy chain V-III region JON                                                           n/a                      12543.6                        1               IPI00382499   IPI00382499
 Ig kappa chain V-I region BAN                                                             n/a                      11822.3                        1               IPI00385555   IPI00385555
 Ig kappa chain V-I region DEE                                                             n/a                      11642.3                        1               IPI00387025   IPI00387025
 Ig kappa chain V-I region Lay                                                             n/a                      11816.1                        1               IPI00387097   IPI00387097
 Ig kappa chain V-I region Mev                                                             n/a                      11852.3                        1               IPI00387105   IPI00387105
 Ig kappa chain V-I region Ni                                                              n/a                      12225.8                        2               IPI00387106   IPI00387106
 Ig kappa chain V-I region Scw                                                             n/a                      11746.2                        1               IPI00387101   IPI00387101
 Ig kappa chain V-I region Wes                                                             n/a                       11590                         1               IPI00003470   IPI00003470
 Ig kappa chain V-III region B6                                                            n/a                      11615.5                        1               IPI00387113   IPI00387113
Ig kappa chain V-III region VH precursor                                                   n/a                      12863.1                        1               IPI00829834   IPI00829834
 Ig kappa chain V-IV region Len                                                            n/a                      12622.4                        3               IPI00387120   IPI00387120
 Ig lambda chain V-I region HA                                                             n/a                      11878.1                        1               IPI00382420   IPI00382420
 Ig lambda chain V-I region NEWM                                                           n/a                      10886.2                        1               IPI00382422   IPI00382422,   IPI00789259
 Ig lambda chain V-I region WAH                                                            n/a                      11707.2                        1               IPI00385254   IPI00385254,   IPI00827522
 Ig lambda chain V-II region BUR                                                           n/a                      11487.7                        1               IPI00003947   IPI00003947
 Ig lambda chain V-III region SH                                                           n/a                      11374.6                        1               IPI00382436   IPI00382436
 Ig lambda chain V-IV region Hil                                                           n/a                      11498.7                        1               IPI00382440   IPI00382440
 Ig lambda chain V-IV region MOL                                                           n/a                      11253.4                        1               IPI00386576   IPI00386576
 Immunglobulin heavy chain variable region (Fragment)                                      n/a                      13417.8                        1               IPI00783287   IPI00783287
 Immunglobulin heavy chain variable region (Fragment)                                      n/a                      14529.3                        1               IPI00783471   IPI00783471
 Myosin-reactive immunoglobulin heavy chain variable region (Fragment)                     n/a                      13135.8                        1               IPI00384391   IPI00384391
 Myosin-reactive immunoglobulin heavy chain variable region (Fragment)                     n/a                      13561.8                        1               IPI00384407   IPI00384407,   IPI00739205
 Myosin-reactive immunoglobulin kappa chain variable region (Fragment)                     n/a                      11743.5                        2               IPI00384401   IPI00384401
 Myosin-reactive immunoglobulin light chain variable region (Fragment)                     n/a                      11615.4                        1               IPI00829980   IPI00829980
 Myosin-reactive immunoglobulin light chain variable region (Fragment)                     n/a                      11720.2                        2               IPI00398220   IPI00398220
NANUC-1 heavy chain (Fragment)                                                             n/a                       13085                         1               IPI00828156   IPI00828156
Putative matrix cell adhesion molecule-3                                                   n/a                      17478.3                        1               IPI00382682   IPI00382682
Putative uncharacterized protein                                                           n/a                       13006                         1               IPI00152189   IPI00152189
Putative uncharacterized protein                                                           n/a                      25005.7                        1               IPI00785200   IPI00785200
Putative uncharacterized protein                                                           n/a                       25090                         2               IPI00784711   IPI00784711
Putative uncharacterized protein                                                           n/a                      25789.4                        1               IPI00784661   IPI00784661
Rheumatoid factor #REF! light chain (Fragment)                                             n/a                      12510.3                        3               IPI00829956   IPI00829956
Rheumatoid factor #REF! light chain (Fragment)                                             n/a                      12748.6                        1               IPI00816799   IPI00816799
Rheumatoid factor light chain variable region precursor (Fragment)                         n/a                      14777.8                        1               IPI00827486   IPI00827486
Rheumatoid factor RF-ER13                                                                  n/a                      13164.6                        1               IPI00748265   IPI00748265
Rheumatoid factor RF-ER9 (Fragment)                                                        n/a                      12608.5                        1               IPI00384404   IPI00384404
Rheumatoid factor VH I region precursor (Fragment)                                         n/a                      14876.7                        1               IPI00827724   IPI00827724
Similar to Anti-IFN-G scFv                                                                 n/a                      13264.7                        1               IPI00883879   IPI00883879
Similar to Hepatitis B virus receptor binding protein                                      n/a                      11553.1                        1               IPI00883855   IPI00883855
Similar to Immunglobulin heavy chain variable region                                       n/a                      13878.5                        1               IPI00884080   IPI00884080,   IPI00888191
Single-chain Fv (Fragment)                                                                 n/a                      26109.2                        1               IPI00470652   IPI00470652
 TNC protein                                                                               n/a                      210467                        13               IPI00867560   IPI00867560
 UGa8H (Fragment)                                                                          n/a                      13041.7                        1               IPI00828099   IPI00828099
 uncharacterized protein ENSP00000374804                                                   n/a                      13061.1                        1               IPI00829827   IPI00829827,   IPI00895946
uncharacterized protein ENSP00000374805                                                    n/a                      12594.8                        1               IPI00854644   IPI00854644
uncharacterized protein ENSP00000375011                                                    n/a                      12492.2                        1               IPI00829812   IPI00829812
uncharacterized protein ENSP00000375026                                                    n/a                      12792.2                        1               IPI00829845   IPI00829845
uncharacterized protein ENSP00000375027                                                    n/a                      12740.6                        1               IPI00829810   IPI00829810
uncharacterized protein ENSP00000375035                                                    n/a                      12656.9                        2               IPI00735451   IPI00735451
uncharacterized protein ENSP00000375044                                                    n/a                      13184.8                        1               IPI00829590   IPI00829590
uncharacterized protein ENSP00000381660 (Fragment)                                         n/a                      13405.6                        1               IPI00872895   IPI00872895
Vh1-D-H3-region (Fragment)                                                                 n/a                      13733.4                        1               IPI00827627   IPI00827627
VK3 protein (Fragment)                                                                     n/a                      11868.8                        1               IPI00827839   IPI00827839
NOTCH2 Neurogenic locus notch homolog protein 2 precursor                                  NOTCH2                   265377                         1               IPI00297655   IPI00297655,   IPI00335544, IPI00515007, IPI00843817
OLFM4 Olfactomedin-4 precursor                                                             OLFM4                     57263                         5               IPI00022255   IPI00022255
ORM1 Alpha-1-acid glycoprotein 1 precursor                                                 ORM1                     23494.1                       11               IPI00022429   IPI00022429,   IPI00884926
ORM2 Alpha-1-acid glycoprotein 2 precursor                                                 ORM2                     23585.2                        8               IPI00020091   IPI00020091
PATE Isoform 1 of Prostate and testis expressed protein precursor                          PATE                     14252.9                        1               IPI00103495   IPI00103495,   IPI00885140
PIGR Polymeric immunoglobulin receptor precursor                                           PIGR                     83265.4                       27               IPI00004573   IPI00004573
PIK3IP1 Isoform 1 of Phosphoinositide-3-kinase-interacting protein 1 precursor             PIK3IP1                  28229.7                        1               IPI00298388   IPI00298388,   IPI00829813, IPI00893223
PIP Prolactin-inducible protein precursor                                                  PIP                      16555.1                       12               IPI00022974   IPI00022974
PLAT Isoform 1 of Tissue-type plasminogen activator precursor                              PLAT                     62898.6                        1               IPI00019590   IPI00019590,   IPI00479511
PLAUR Isoform 1 of Urokinase plasminogen activator surface receptor precursor              PLAUR                    36959.2                        1               IPI00010676   IPI00010676,   IPI00215706
PLG Plasminogen precursor                                                                  PLG                      90549.4                        8               IPI00019580   IPI00019580
PM20D1 Isoform 1 of Probable carboxypeptidase PM20D1 precursor                             PM20D1                    55710                         3               IPI00418413   IPI00418413
PODXL Podocalyxin-like protein 1 precursor                                                 PODXL                    55577.7                        1               IPI00299116   IPI00299116,   IPI00604773
PROM1 Prominin-1 precursor                                                                 PROM1                    97188.4                       13               IPI00012540   IPI00012540
PROS1 Vitamin K-dependent protein S precursor                                              PROS1                    75105.4                        1               IPI00294004   IPI00294004,   IPI00795619, IPI00873445, IPI00878131
PRSS8 Prostasin precursor                                                                  PRSS8                    36413.1                        2               IPI00329538   IPI00329538
PRTN3 Myeloblastin precursor                                                               PRTN3                    27788.5                        1               IPI00027409   IPI00027409
PSAP Isoform Sap-mu-0 of Proactivator polypeptide precursor                                PSAP                      58094                         6               IPI00012503   IPI00012503,   IPI00219825
QSOX1 Isoform 1 of Sulfhydryl oxidase 1 precursor                                          QSOX1                    82560.7                        1               IPI00003590   IPI00003590,   IPI00465016, IPI00872013
RARRES1 Isoform 2 of Retinoic acid receptor responder protein 1                            RARRES1                  33267.5                        2               IPI00410240   IPI00410240
RNASET2 Isoform 1 of Ribonuclease T2 precursor                                             RNASET2                  29463.2                        1               IPI00414896   IPI00414896,   IPI00855775
RPS27A;UBC;UBB ubiquitin and ribosomal protein S27a precursor                              RPS27A                   17947.6                        3               IPI00179330   IPI00179330,   IPI00456429, IPI00719280, IPI00743241, IPI00743650, IPI00744274, IPI00784990, IPI00789107, IPI00789823, IPI00790633, IPI00792712, IPI00793330, IPI00793729, IPI00793810, IPI00794211, IPI00794925, IPI00795527, IPI00796007, IPI00796600, IPI00797400, IPI00798127, IPI00798155, IPI00873444
S100A11 Protein S100-A11                                                                   S100A11                  11723.1                        2               IPI00013895   IPI00013895
S100A12 Protein S100-A12                                                                   S100A12                  10557.4                        3               IPI00218131   IPI00218131
S100A7 Protein S100-A7                                                                     S100A7                   11453.7                        3               IPI00219806   IPI00219806
S100A8 Protein S100-A8                                                                     S100A8                   10816.9                        2               IPI00007047   IPI00007047
S100A9 Protein S100-A9                                                                     S100A9                   13224.3                        4               IPI00027462   IPI00027462
SCFV Single-chain Fv (Fragment)                                                            SCFV                     25552.2                        1               IPI00748998   IPI00748998
SCGB1A1 Uteroglobin precursor                                                              SCGB1A1                   9976.2                        1               IPI00006705   IPI00006705
SCGB1D2 Secretoglobin family 1D member 2 precursor                                         SCGB1D2                   9907.5                        5               IPI00001469   IPI00001469
SDCBP Syntenin-1                                                                           SDCBP                    32427.3                        3               IPI00299086   IPI00299086,   IPI00478874, IPI00479018
SEMG1 Isoform 1 of Semenogelin-1 precursor                                                 SEMG1                    52111.7                        1               IPI00023020   IPI00023020,   IPI00414684
SEMG2 Semenogelin-2 precursor                                                              SEMG2                    65425.1                        2               IPI00025415   IPI00025415
SEPP1 Selenoprotein P precursor                                                            SEPP1                    42686.3                        1               IPI00029061   IPI00029061,   IPI00847381
SERPINA1 Isoform 1 of Alpha-1-antitrypsin precursor                                        SERPINA1                 46719.9                       19               IPI00553177   IPI00553177
SERPINA3 Alpha-1-antichymotrypsin precursor                                                SERPINA3                 50582.5                        9               IPI00550991   IPI00550991,   IPI00847635
SERPINA6 Corticosteroid-binding globulin precursor                                         SERPINA6                 45124.1                        3               IPI00027482   IPI00027482
SERPINA7 Thyroxine-binding globulin precursor                                              SERPINA7                 46307.6                        1               IPI00292946   IPI00292946
SERPINC1 Antithrombin III variant                                                          SERPINC1                 52675.1                        1               IPI00032179   IPI00032179
SERPINC1 SERPINC1 protein                                                                  SERPINC1                 29075.3                        5               IPI00844156   IPI00844156
SERPIND1 Serpin peptidase inhibitor, clade D (Heparin cofactor), member 1                  SERPIND1                 60162.6                        1               IPI00292950   IPI00292950,   IPI00879573
SERPINF1 Pigment epithelium-derived factor precursor                                       SERPINF1                 46326.4                        1               IPI00006114   IPI00006114,   IPI00796279
SERPINF2 SERPINF2 protein                                                                  SERPINF2                 55047.2                        1               IPI00029863   IPI00029863,   IPI00879231
SERPING1 Plasma protease C1 inhibitor precursor                                            SERPING1                 55137.5                       12               IPI00291866   IPI00291866
SERPINI1 Neuroserpin precursor                                                             SERPINI1                 46409.9                        1               IPI00016150   IPI00016150
SIRPA signal-regulatory protein alpha precursor                                            SIRPA                    54947.7                        2               IPI00332887   IPI00332887,   IPI00375705, IPI00656087, IPI00656113, IPI00848309
SLPI Antileukoproteinase precursor                                                         SLPI                      14308                         6               IPI00008580   IPI00008580
SOD1 Superoxide dismutase                                                                  SOD1                     15917.3                        1               IPI00218733   IPI00218733
SOD2 Superoxide dismutase [Mn], mitochondrial precursor                                    SOD2                     24704.6                        3               IPI00022314   IPI00022314,   IPI00847322, IPI00896370
SOD3 Extracellular superoxide dismutase [Cu-Zn] precursor                                  SOD3                     25832.3                        5               IPI00027827   IPI00027827
SPARC SPARC precursor                                                                      SPARC                    34613.9                        1               IPI00014572   IPI00014572
                                                                                                                                                                                                                         Supplementary Table 2




SPINT1 Isoform 2 of Kunitz-type protease inhibitor 1 precursor          SPINT1   56866.6    3   IPI00011643   IPI00011643,   IPI00376403
SPP1 Isoform C of Osteopontin precursor                                 SPP1      32337     2   IPI00218875   IPI00218875
STC2 Stanniocalcin-2 precursor                                          STC2     33230.1    2   IPI00008780   IPI00008780
STOM Erythrocyte band 7 integral membrane protein                       STOM     31714.1    2   IPI00219682   IPI00219682
TCN1 Transcobalamin-1 precursor                                         TCN1     48189.7    6   IPI00299729   IPI00299729
TF Serotransferrin precursor                                            TF       77032.2   35   IPI00022463   IPI00022463,   IPI00798430
TFF1 Trefoil factor 1 precursor                                         TFF1       9131     1   IPI00022283   IPI00022283
TFF3 trefoil factor 3 precursor                                         TFF3     14233.9    2   IPI00018909   IPI00018909,   IPI00745224, IPI00873997
THBS1 Thrombospondin-1 precursor                                        THBS1    129364     6   IPI00296099   IPI00296099
TTR Transthyretin precursor                                             TTR      15868.9    9   IPI00022432   IPI00022432,   IPI00855916
TUBA1C TUBA1C protein                                                   TUBA1C    36725     1   IPI00166768   IPI00166768,   IPI00180675, IPI00218343, IPI00387144, IPI00478908, IPI00792677, IPI00795002, IPI00873427
TXN Thioredoxin                                                         TXN      11719.3    1   IPI00216298   IPI00216298
VTN Vitronectin precursor                                               VTN      54288.1    5   IPI00298971   IPI00298971
WFDC2 Isoform 1 of WAP four-disulfide core domain protein 2 precursor   WFDC2    12974.4    3   IPI00291488   IPI00291488

				
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