Table st2_ XLSX - mBio

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Table st2_ XLSX - mBio Powered By Docstoc
					Table S2 Detailed Summary of Finding for South African Isolates.

                                                                                     Blp
                                    BIR     ASEI BIR         Database            Inhibition or BlpC
STRAIN#   BlpC type*   Serotype   PATTERN   Fragments        match      Site**    Immunity‡ secretion
      124    P164         6B         1      2.3, 1.2, 370    2306         C                     yes
      125     6At         45         6      5,                            C                     no
      126     R6         23A         1      2.3, 1.2, 370    2306         C                     no
      127     6A          22         8      2.9, 0.5                      C                     no
      128     6A         19F                no amp                        C                     no
      129     R6           3         11     2.0, 0.5         SP3BS71      C                     no
      130     R6          6B          2     3.8, 1.7,.55     TIGR4        C            I        no
      131     6A         23F          5     3.2, 1.7                      C            K        yes
      132     6A          29          5     3.2, 1.7                      C            K        yes
      133     R6          6A          2     3.8, 1.7,.55     TIGR4        C            K        yes
      134    P164        19F          6     5, .36                        C                     no
      135    P164         6A          3     2.3, 0.95                     C                     yes
      136     6At        19F          6     5,                            C                     no
      137     6A         23F          5     3.2, 1.7                      C                     no
      138     6At        19F          6     5,                            C                     no
      139     T4          14          7     2.4, 1.2, .550   ATCC700669   C                      x
      140     R6         35B         12     4.5, .55                      C            K        yes
      141     R6         11A          3     2.3, 0.95        1031         C                     no
      143     6A         19F          4     6.0, 2.7                      C                     yes
      144     R6          6A         13     1.9, 1.2                      C                     yes
      146    P164         6B          1     2.3, 1.2, 370    2306         C                     yes
      147     R6         23F          2     3.8, 1.7,.55     TIGR4        C            I        no
      148     6A          14         14     2.7, 1.7, .8     CPSP14       C                     yes
      149     R6         23A          1     2.3, 1.2, 370    2306         C                     no
      151     R6          29          1     2.3, 1.2, 370    2306         C                     no
      152     R6         11A          3     2.3, 0.95        1031         C                     no
      153     6A           3         15     2.8, 0.95                     C                     no
      154     R6          22          3     2.3, 0.95        1031         C                     no
      155    P155         45          9     2.3, 2.1                      C            K        yes
      156     6A          35         17     3.5,1.8                       C                     no
      157     6A         19F          4     6.0, 2.7                       I                    yes
      158     6A          6A          2     3.8, 1.7,.55     TIGR4         I                    yes
      159     6A         23F         10     2.3, 1.8, 1.3    CDC1873-00    I                    yes
      160     T4          6A          7     2.4, 1.2, .550   ATCC700669    I                     x
      161    P164        15B          1     2.3, 1.2, 370                  I                    no
      162     6A         19F          4     6.0, 2.7                       I                    yes
      163     6A         19F          4     6.0, 2.7                       I                    yes
      164    P164         6B          9     2.3, 2.1                       I           K        yes
      165     R6         23F          1     2.3, 1.2, 370    2306          I                    no
      166     T4          22          3     2.3, 0.95        1031          I                     x
      167     6A         9N           1     2.3, 1.2, 370    2306          I                    no
      168     6A         18A          1     2.3, 1.2, 370    2306          I                    no
      169     6At        19F         16     5.0, 2.7                       I                    no
      170     R6         23F          2     3.8, 1.7,.55     TIGR4         I           I        no
      171     6A          6A         10     2.3, 1.8, 1.3    CDC1873-00    I                    yes
      172     6A         15B                no amp                       I                  no
      173    P164         6B         1      2.3, 1.2, 370   2306         I                  yes
      174     R6         23F         2      3.8, 1.7,.55    TIGR4        I        I         no
      175     6A          22         8      2.9, 0.5                     I                  no
      176     6A         9N          1      2.3, 1.2, 370   2306         I                  no
      177     6A         18A         1      2.3, 1.2, 370   2306         I                  no
* 6At, adjacent insertion sequence.
** C, colonizing; I, Invasive.
‡ I, Immunity only; K, Inhibition and Immunity
¥ NA, no amplification with flanking primers; DEL, 1kb deletion in blpA by PCR.
§ For fully sequenced genes, predicted number of ORF. 1, single full length BlpA predicted, 2, Two separatate Blp
fragments predicted.
# of GCTT
 repeats¥ blpA ORF§
     1            1
    NA
     2
     2
    NA
     2
     2
     1            1
     1            1
     1            1
   DEL
     1
   DEL
     1
    NA
     2
     1            1
     1            1
     1
     1            1
     1
     2            2
     1
     2
     2
     1
     1
     1
     1            1
     1
     1
     1            1
     1
     2
    NA
     1            1
     1            1
     1            1
     2
     2
     2
     2
   DEL
     2
     1
              NA
               1            1
               2            2
               2
               2
               2




d, 2, Two separatate BlpA

				
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