Ctl 1
Scale magnification: 20x
Open rgn file: ../data/100701_5.rgn
Number of cells read in: 236
Number of active cells: 236
Number of inactive cells: 0
read_binary is false
Open nf file: ../data/100701_d1a.log
Status: Reading ASCII file ../data/100701_d1a.log
Diff between timestamps: 0.04sec
current_nf_file 100701_d1a.log
At least One file was not loaded
rgn file 100701_5.rgn
nf file 100701_d1a.log
wi file null
Creating cog file ../op/c_100701_d1a_1.ps
Cells recruited before reset: 121
Moments: s00 121.0 s01: 32920.0 s10: 29096.0 s11: 691671.297520661 s02: 975937.4710743804 s20: 2029658.0826446288
Orientation: 26.35136346029284 roundness 0.26696749643745354
centre of mass: 240.46280991735537 272.06611570247935
Sumix 140.01992734084138 sumiy 72.34675267646233
Creating file ../op/m_100701_d1a_249.ps
finished writing postscript file
Creating file ../op/100701_d1a_1.ris
0 recruited cells rejected from rise times file
n = 121
Duration mean +/- sd: 56.16528925619835 21.46276695610793
Peak_a mean +/- sd: 129.32320786184815 13.311378617466058
Rate mean +/- sd: 1.433851239669422 0.8849650099181634
Velocity correlation 0.12532087611880535
Cells: 9 30 Onsets: 106 179 dt 73 dist 142.0 speed 48.63013698630137 um/s
Cells: 172 37 Onsets: 140 222 dt 82 dist 278.0 speed 84.7560975609756 um/s
Cells: 182 50 Onsets: 130 247 dt 117 dist 189.0 speed 40.38461538461539 um/s
Cells: 11 136 Onsets: 121 230 dt 109 dist 126.0 speed 28.89908256880734 um/s
Cells: 30 39 Onsets: 179 232 dt 53 dist 103.0 speed 48.58490566037736 um/s
Cells: 32 50 Onsets: 100 247 dt 147 dist 262.0 speed 44.5578231292517 um/s
Mean velocity 49.302110215054796 n 6 s.d. 17.205932408402504
Pooled velocity 47.26905304204381 n 6 onsets 129 226 dist 183.40392580312997
Ctl 2
Scale magnification: 20x
Open rgn file: ../data/100701_5.rgn
Number of cells read in: 236
Number of active cells: 236
Number of inactive cells: 0
read_binary is false
Open nf file: ../data/100701_d1b.log
Status: Reading ASCII file ../data/100701_d1b.log
Diff between timestamps: 0.08sec
Status: Loading frame 100
Status: Loading frame 200
Status: Loading frame 300
Status: Loading frame 400
Status: Frames per second: 12.5
Status: Frames read in: 463
Status: lines skipped : 0
current_nf_file 100701_d1b.log
At least One file was not loaded
rgn file 100701_5.rgn
nf file 100701_d1b.log
wi file null
Creating cog file ../op/c_100701_d1b_1.ps
Cells recruited before reset: 18
Moments: s00 171.0 s01: 31954.0 s10: 52446.0 s11: -254810.85964912278 s02: 2298977.9064327474 s20: 2069815.7894736833
Orientation: -57.106034136079174 roundness 0.773204559242895
centre of mass: 306.70175438596493 186.8654970760234
Sumix 120.0337277204194 sumiy 105.54811867196813
Creating file ../op/m_100701_d1b_243.ps
finished writing postscript file
Creating file ../op/100701_d1b_1.ris
Cannot interpolate for roi 53
Cannot interpolate for roi 55
Cannot interpolate for roi 56
Cannot interpolate for roi 61
Ignoring 53 325 -1 -1 306 117.808 333 2.137 114.678 330 375.0 327 328
Ignoring 55 326 -1 -1 307 133.394 334 3.985 128.712 331 423.0 326 328
Ignoring 56 316 -1 -1 297 126.824 333 1.439 121.687 327 405.0 324 325
Ignoring 61 328 -1 -1 309 110.782 334 1.358 109.195 333 435.0 332 331
4 recruited cells rejected from rise times file
n = 167
Duration mean +/- sd: 33.77245508982036 7.731014331592495
Peak_a mean +/- sd: 128.48367365371996 10.584868308857779
Rate mean +/- sd: 2.4350838323353288 1.3371687150890346
Velocity correlation 0.42497613418124935
Cells: 189 102 Onsets: 22 58 dt 36 dist 145.0 speed 50.34722222222222 um/s
Cells: 86 122 Onsets: 32 87 dt 55 dist 159.0 speed 36.13636363636363 um/s
Cells: 100 125 Onsets: 56 89 dt 33 dist 104.0 speed 39.39393939393939 um/s
Cells: 84 110 Onsets: 34 64 dt 30 dist 118.0 speed 49.166666666666664 um/s
Cells: 108 133 Onsets: 56 103 dt 47 dist 174.0 speed 46.276595744680854 um/s
Cells: 147 151 Onsets: 201 72 dt 129 dist 109.0 speed 10.562015503875969 um/s
Mean velocity 38.64713386129146 n 6 s.d. 13.548658516024496
Pooled velocity 132.87682265918312 n 6 onsets 66 78 dist 127.5617497528158
3d control
Scale magnification: 20x
Open rgn file: ../data/100701_5.rgn
Number of cells read in: 236
Number of active cells: 236
Number of inactive cells: 0
read_binary is false
Open nf file: ../data/100701_d1c.log
Status: Reading ASCII file ../data/100701_d1c.log
Diff between timestamps: 0.04sec
Status: Loading frame 100
Status: Loading frame 200
Status: Loading frame 300
Status: Frames per second: 25.0
Status: Frames read in: 375
Status: lines skipped : 0
current_nf_file 100701_d1c.log
At least One file was not loaded
rgn file 100701_5.rgn
nf file 100701_d1c.log
wi file null
Creating cog file ../op/c_100701_d1c_1.ps
Cells recruited before reset: 63
50
100
150
200
250
300
350
End of frames
Cells recruited before reset: 63
Moments: s00 63.0 s01: 16163.0 s10: 19997.0 s11: 240168.55555555553 s02: 518927.55555555556 s20: 266261.26984127
Orientation: 58.87260390004493 roundness 0.182578899572471
centre of mass: 317.41269841269843 256.55555555555554
Sumix 102.66010816514682 sumiy 43.8658965525481
Creating file ../op/m_100701_d1c_192.ps
finished writing postscript file
Creating file ../op/100701_d1c_1.ris
0 recruited cells rejected from rise times file
n = 63
Duration mean +/- sd: 53.19047619047619 13.743520427514074
Peak_a mean +/- sd: 127.99262124058491 15.394413888829202
Rate mean +/- sd: 1.5144761904761903 1.3226536920583734
Velocity correlation 0.9811353919625988
Cells: 69 130 Onsets: 41 152 dt 111 dist 174.0 speed 39.189189189189186 um/s
Cells: 172 145 Onsets: 41 213 dt 172 dist 246.0 speed 35.75581395348837 um/s
Cells: 9 42 Onsets: 70 231 dt 161 dist 219.0 speed 34.006211180124225 um/s
Cells: 31 205 Onsets: 68 231 dt 163 dist 218.0 speed 33.43558282208589 um/s
Cells: 70 46 Onsets: 73 219 dt 146 dist 218.0 speed 37.32876712328767 um/s
Cells: 22 39 Onsets: 68 247 dt 179 dist 266.0 speed 37.150837988826815 um/s
Mean velocity 36.14440037616703 n 6 s.d. 1.9894272694684778
Pooled velocity 35.96810357116042 n 6 onsets 60 215 dist 223.0022421411946
GABA wave
Scale magnification: 20x
Open rgn file: ../data/100701_5.rgn
Number of cells read in: 236
Number of active cells: 236
Number of inactive cells: 0
read_binary is false
Open nf file: ../data/100701_d2.log
Status: Reading ASCII file ../data/100701_d2.log
Diff between timestamps: 0.16sec
Status: Loading frame 100
Status: Loading frame 200
Status: Loading frame 300
Status: Loading frame 400
Status: Loading frame 500
Status: Frames per second: 6.3
Status: Frames read in: 500
Status: lines skipped : 0
current_nf_file 100701_d2.log
At least One file was not loaded
rgn file 100701_5.rgn
nf file 100701_d2.log
wi file null
End of frames
Creating cog file ../op/c_100701_d2_1.ps
Timestep 71
Creating trace file ../op/t_100701_d2_499.ps
finished writing postscript file
Moments: s00 236.0 s01: 49239.0 s10: 70445.0 s11: -223922.8601694916 s02: 3028838.38559322 s20: 4454488.995762711
Orientation: -8.719645621425292 roundness 0.6670987907654545
centre of mass: 298.4957627118644 208.63983050847457
Sumix 137.91474566832755 sumiy 112.64340750802904
Creating file ../op/100701_d2_1.ris
Roi 222 has relative onset of -1
0 recruited cells rejected from rise times file
n = 236
Duration mean +/- sd: 293.8771186440678 19.650919291115205
Peak_a mean +/- sd: 303.33218752139356 43.1603678350299
Rate mean +/- sd: 8.866529661016958 2.458299455969903
Velocity correlation 0.9658733847109664
Cells: 189 126 Onsets: 21 51 dt 30 dist 225.0 speed 47.25 um/s
Cells: 193 216 Onsets: 27 73 dt 46 dist 373.0 speed 51.084782608695654 um/s
Cells: 101 49 Onsets: 38 81 dt 43 dist 379.0 speed 55.527906976744184 um/s
Cells: 132 75 Onsets: 52 81 dt 29 dist 274.0 speed 59.52413793103448 um/s
Cells: 115 210 Onsets: 40 76 dt 36 dist 279.0 speed 48.825 um/s
Cells: 109 43 Onsets: 33 83 dt 50 dist 366.0 speed 46.11599999999999 um/s
Mean velocity 51.38797125274572 n 6 s.d. 4.741896737072348
Pooled velocity 50.75547715802169 n 6 onsets 35 74 dist 314.2005728829914