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The Nebraska Center for Rapid

Bioanalysis





• An Overview of the UNMC current COBRE

centers and Nanoimaging core facility





Yuri Lyubchenko



COBRE Retreat - January 16, 2009

Nebraska Center for Cellular Signaling



PI: Peggy Wheelock, Ph.D.



First COBRE grant was received in 2003.





This CoBRE grant was to establish a center for cellular signaling that will

function to bring together senior investigators to serve as mentors for junior

investigators.





Five junior investigator projects are funded on this grant and the goal was

to assist these investigators in securing independent funding for their work.

Nebraska Center for Cellular Signaling



PI: Peggy Wheelock, Ph.D.



July 2008: NIH renews Dr. Wheelock's CoBRE grant





• the winning formula Peggy Wheelock - to have two high profile

researchers as mentors for five years.

• seven junior investigators at UNMC obtained their own RO1 grants from

the National Institutes of Health (NIH).

•This success has led to the NIH approving a renewal of Dr. Wheelock's

Centers of Biomedical Research Excellence (CoBRE) grant for another five

years at $10.9 million.





Peggy Wheelock: The grant has allowed us to bring together

outstanding junior and senior faculty with similar interests, which greatly

enhances the science knowledge and opportunities for collaboration."

Nebraska Center for

Nanomedicine



• Dr. Kabanov, the Parke-Davis Chair in Pharmaceutics,

UNMC College of Pharmacy, is the director of the

Nebraska Center for Nanomedicine



• Funding - $10.6 M



• "This grant allows us to attract the best and brightest

scientists to Nebraska, to develop novel technologies

that could contribute to the economy of the state with the

help of spin-off companies that would bring the results of

the scientific research to public use," Dr. Kabanov said.

Nebraska Center for

Nanomedicine





• Nanomedicine defines the emerging area

of science that uses nanomaterials, small

polymeric particles to deliver drugs safely

to disease sites, such as cancer tumors.

Center of Drug Deliver and

Nanomedicine (CDDN)





• This regent-approved Center was established

to support an interdisciplinary team of

scientists with specific expertise in

nanomedicine, drug delivery, therapeutics,

and diagnostics.

• Nanomedicine is a medical intervention at

the molecular scale for curing disease or

repairing damaged tissue.

Nebraska Center for Nanomedicine

• The four projects currently being supported through the COBRE funding are as

follows.



Project 1:

• Principal investigator: Elena V. Batrakova, Ph.D., assistant professor of pharmaceutical sciences.

• Mentor: Howard Gendelman, M.D., chairman, department of pharmacology and experimental neuroscience,

director, Center for Neurovirology and Neurodegenerative Disorders.

• Dr. Batrakova's project focuses on creating a drug delivery system to treat Parkinson's disease using nanozymes

and immune cells in the brain as the delivery agent. Nanozymes are tiny particles consisting of an enzyme in a

protective polymer coat.





• Project 2:

• Principal investigator: Matthew Zimmerman, Ph.D., assistant professor of cellular and integrative physiology.

• Mentor: Irving Zucker, Ph.D., professor and chairman of the cellular and integrative physiology department.

• Dr. Zimmerman's research project focuses on using antioxidant therapy and nanozymes to treat hypertension.





• Project 3:

• Principal investigator: Huanyu Dou, Ph.D., assistant professor, department of pharmacology and experimental

neuroscience.

• Mentor: Surinder Batra, Ph.D., professor in the department of biochemistry and molecular biology.

• Dr. Dou's research project focuses on developing a cell-based nanoformulated anti-tumor therapy that would

improve biodistribution of the drug to the tumor and reduce chemotherapy-induced neurotoxicity.





• Project 4:

• Principal investigator: Joseph Vetro, Ph.D., assistant professor, Center for Drug Delivery and Nanomedicine,

department of pharmaceutical sciences.

• Mentor: Alexander Kabanov, Ph.D., director, Nebraska Center for Nanomedicine.

• Dr. Vetro's research focuses on inhibiting the growth of cancer tumors by using specially developed nanocarrierse

that disrupt the tumor's ability to recruit surrounding blood vessels.

UNMC Shared Resources/Core Facilities





http://www.unmc.edu/dept/vcr/index.cfm?L1_ID=26&CONREF=18









Mass Spectrometry and Proteomics Core Facility







Nanoimaging Core Facility

Nanoimaging Core Facility



The facility is equipped with three instruments:



• The combination state of the art AFM microscope (Asylum

Research Veeco, Santa Brabara, CA) mounted on an inverted

fluorescence microscope (Olympus), allowing simultaneous

detection of fluorescently labeled samples, high resolution AFM

imaging, force spectroscopy, and manipulation at the

nanoscale.

• The stand-alone AFM (MM AFM, Veeco, Santa Brabara, CA),

capable of high-resolution imaging of various biological

samples in air and aqueous solution.

•AFM force robot (JPK Germany) allowing automate acqusition

of the data on the intermolecular interactions various molecular

systems



•The facility provides expertise for researchers in imaging, force

spectroscopy analysis, elasticity measurements and other

applications of Atomic Force Microscopy

AFM-optical microscope

MM AFM microscope

MM AFM microscope

JPK Force Robot

Force Spectroscope

Base

Force

Spectrosope

Head Controller with

TCP/IP-Interface









Stable base frame

with active User PC with

vibration isolation ForceRobot Software

Nebraska Center for Cellular Signaling



PI: Peggy Wheelock, Ph.D.



July 2008: NIH renews Dr. Wheelock's CoBRE grant





• the winning formula Peggy Wheelock - to have two high profile

researchers as mentors for five years.

• seven junior investigators at UNMC obtained their own RO1 grants from

the National Institutes of Health (NIH).

•This success has led to the NIH approving a renewal of Dr. Wheelock's

Centers of Biomedical Research Excellence (CoBRE) grant for another five

years at $10.9 million.





http://www.unmc.edu/dentistry/wiki/NCCS.htm

http://app1.unmc.edu/publicaffairs/todaysite/sitefiles/today_full.cfm?match=

4656

http://www.unmc.edu/dentistry/wiki/Dr%20Margaret%20J%20Wheelock.htm

UNMC: New Potential

projects

LC-MS Determination of Bile

Acid-Sulfates As Biomarkers

for Liver Function





Yazen Alnouti, Ph.D

Assistant Professor

Department of Pharmaceutical Sciences

University of Nebraska Medical Center

BA Enterohepatic Recirculation









95%









Under normal conditions, BAs are contained within

the enteroheaptic system, spill over into blood is

minimum, and urinary excretion is negligible

Rapid detection of drugs for

protein misfolding diseases.



Alexey Krasnoslobodtsev,

Department of Pharmaceutical Sciences,

University of Nebraska Medical Center

COBRE 16 January, 2009

Conformational prerequisites for amyloidosis

Natively folded

conformations of

various types

Partially

folded

intermediate Misfold

1









Misfold

2









Misfold

3

Center for Pharmaceutical

Biophysics

• The research outcomes of the Center will serve as the

basis for the discovery of diagnostic agents and new

pharmaceutical entities for the prevention, treatment

and/or cure of diseases.

• The Center’s mission is to unite efforts of researchers

working in the areas of basic and applied pharmaceutical

and biomedical sciences, chemistry, biochemistry, and

engineering who are exploring and developing new

technologies for the analysis of biological nanosystems

in such biopharmaceutical science fields as high-

throughput screening of drugs, drug development,

diagnostics, therapeutics, single molecule

imaging/tracking and biomarker assays.



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