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Tabel S4

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Tabel S4 Powered By Docstoc
					id         source           reads_no_total       5p_source         5p_EA
mir-192    hsa-mir-192                 650721    hsa-miR-192           232585
let-7g     mmu-let-7g                  622842    mmu-let-7g            205343
mir-215    hsa-mir-215                 104873    hsa-miR-215             32750
let-7e     mmu-let-7e                   29583    mmu-let-7e              12128
mir-219    cfa-mir-219-2                17576    cfa-miR-219                89
mir-1839   cfa-mir-1839                 13174    cfa-miR-1839             5413
mir-148a   mmu-mir-148a                  8931    mmu-miR-148a*              33
mir-194    hsa-mir-194-2                 7351    hsa-miR-194              2197
mir-330    hsa-mir-330                   6302    hsa-miR-330-5p              0
mir-423    hsa-mir-423                   3773    hsa-miR-423-5p            808
mir-423a   cfa-mir-423a                  3767    cfa-miR-423a              807
mir-99b    hsa-mir-99b                   2719    hsa-miR-99b              1081
mir-34c    hsa-mir-34c                   2066    hsa-miR-34c-5p            941
mir-146b   hsa-mir-146b                  2034    hsa-miR-146b-5p           811
mir-127    hsa-mir-127                   1995    hsa-miR-127-5p            126
mir-193a   hsa-mir-193a                    995   hsa-miR-193a-5p           166
mir-382    mmu-mir-382                     946   mmu-miR-382               221
mir-499    hsa-mir-499                     942   hsa-miR-499-5p            345
mir-598    hsa-mir-598                     632   na*                         0
mir-323    mmu-mir-323                     627   mmu-miR-323-5p              7
mir-495    hsa-mir-495                     613   na*                         0
mir-335    rno-mir-335                     595   rno-miR-335               233
mir-125a   hsa-mir-125a                    495   hsa-miR-125a-5p           198
mir-193    rno-mir-193                     494   rno-miR-193*                0
mir-137    rno-mir-137                     478   na*                         3
mir-203    hsa-mir-203                     458   na*                         0
mir-217    hsa-mir-217                     455   hsa-miR-217                75
mir-374    mmu-mir-374                     433   mmu-miR-374               153
mir-374b   hsa-mir-374b                    433   hsa-miR-374b              153
mir-379    mmu-mir-379                     432   mmu-miR-379               159
mir-885    hsa-mir-885                     367   hsa-miR-885-5p              1
mir-532    mmu-mir-532                     274   mmu-miR-532-5p            102
mir-503    rno-mir-503                     245   rno-miR-503                58
mir-409    hsa-mir-409                     222   hsa-miR-409-5p             28
mir-135    cfa-mir-135                     178   na*                        13
mir-135a   mmu-mir-135a-2                  178   mmu-miR-135a               13
mir-383    hsa-mir-383                     176   hsa-miR-383                86
mir-1307   hsa-mir-1307                    172   na*                        36
mir-132    rno-mir-132                     168   na*                        33
mir-101b   rno-mir-101b                    156   na*                         0
mir-339    hsa-mir-339                     155   hsa-miR-339-5p              1
mir-210    hsa-mir-210                     143   na*                         0
mir-370    hsa-mir-370                     136   na*                         4
mir-760    hsa-mir-760                     127   na*                         0
mir-181b   mmu-mir-181b-2                  112   mmu-miR-181b               43
mir-1181   hsa-mir-1181                    105   hsa-miR-1181                0
mir-500    cfa-mir-500                     103   na*                         0
mir-502    cfa-mir-502                     103   na*                         0
mir-493     rno-mir-493                        92   na*                         25
mir-181a    hsa-mir-181a-2                     80   hsa-miR-181a                11
mir-584     hsa-mir-584                        80   hsa-miR-584                 30
mir-369     hsa-mir-369                        70   hsa-miR-369-5p              18
mir-886     hsa-mir-886                        65   hsa-miR-886-5p              25
mir-769     hsa-mir-769                        60   hsa-miR-769-5p              17
let-7i      hsa-let-7i                         59   hsa-let-7i                  14
mir-136     rno-mir-136                        56   rno-miR-136                  4
mir-1250    hsa-mir-1250                       55   hsa-miR-1250                22
mir-1262    hsa-mir-1262                       47   hsa-miR-1262                26
mir-574     cfa-mir-574                        47   na*                         16
mir-450b    cfa-mir-450b                       43   cfa-miR-450b                14
mir-199a    mmu-mir-199a-2                     42   mmu-miR-199a-5p             18
mir-375     hsa-mir-375                        41   na*                          0
mir-1271    cfa-mir-1271                       40   cfa-miR-1271                 7
mir-7       hsa-mir-7-3                        35   hsa-miR-7                    9
mir-182     hsa-mir-182                        33   hsa-miR-182                 12
mir-1247    hsa-mir-1247                       31   hsa-miR-1247                 9
mir-935     hsa-mir-935                        26   na*                          0
mir-1255a   hsa-mir-1255a                      24   hsa-miR-1255a               10
mir-128     hsa-mir-128-2                      20   na*                          8
mir-1249    hsa-mir-1249                       16   na*                          0
mir-1258    hsa-mir-1258                       16   na*                          0
mir-138     rno-mir-138-1                      15   rno-miR-138                  0
mir-138a    cfa-mir-138a                       15   cfa-miR-138a                 0
mir-1825    hsa-mir-1825                       15   na*                          0
mir-548k    hsa-mir-548k                       15   hsa-miR-548k                10
mir-656     hsa-mir-656                        15   na*                          0
mir-551b    hsa-mir-551b                       14   hsa-miR-551b*                3
mir-371     hsa-mir-371                        13   hsa-miR-371-5p               8
mir-663     hsa-mir-663                        13   hsa-miR-663                  4
mir-1254    hsa-mir-1254                       12   hsa-miR-1254                 4
mir-514     hsa-mir-514-2                      11   na*                          5
mir-1259    hsa-mir-1259                       10   hsa-miR-1259                 0
mir-1277    hsa-mir-1277                       10   na*                          7
mir-654     hsa-mir-654                        10   hsa-miR-654-5p               1




#Notes:
# "id": miRNA id derived from homologous miRNAs in human, mouse, rat, and dog.
# "source": homologous miRNA precursors in human, mouse, rat, and dog which Illumina reads were mapped
# "reads_no_total": total Illumina reads mapped on the precursor.
# "5p_source", "3p_source": mature miRNAs on 5' arm or 3' arm of the "source" precursor.
# "5p_EA", "5p_LT", "5p_PR": total reads mapped on 5' arm of the precursor.
# "3p_EA", "3p_LT", "3p_PR": total reads mapped on 3' arm of the precursor.
5p_LT       5p_PR       3p_source    3p_EA      3p_LT      3p_PR
    212073      206055 hsa-miR-192*           2          3          3
    205734      211765 mmu-let-7g*            0          0          0
      33983       38140 na*                   0          0          0
       9242        8202 na*                   4          4          3
         82          86 cfa-miR-219*       7838       5241       4240
       3781        3980 na*                   0          0          0
         45          23 mmu-miR-148a       2091       3129       3610
       2350        2804 hsa-miR-194*          0          0          0
          0           0 hsa-miR-330-3p     2827       1795       1680
        879        1085 hsa-miR-423-3p      381        294        326
        877        1082 na*                 381        294        326
        726         795 hsa-miR-99b*         65         23         29
        540         584 hsa-miR-34c-3p        1          0          0
        605         613 hsa-miR-146b-3p       2          1          2
         79          62 hsa-miR-127-3p      583        474        671
        150         185 hsa-miR-193a-3p     173        176        145
        118         118 mmu-miR-382*        212        130        147
        293         304 hsa-miR-499-3p        0          0          0
          0           0 hsa-miR-598         239        193        200
          9           9 mmu-miR-323-3p      273        139        190
          0           0 hsa-miR-495         262        170        181
        168         187 na*                   1          0          6
        134         157 hsa-miR-125a-3p       5          1          0
          0           0 rno-miR-193         173        176        145
          1           1 rno-miR-137         204        134        135
          0           0 hsa-miR-203         188        140        130
        278         102 na*                   0          0          0
        141         117 mmu-miR-374*          8          8          6
        141         117 hsa-miR-374b*         8          8          6
        151         122 na*                   0          0          0
          4           0 hsa-miR-885-3p      166        112         84
         68          89 mmu-miR-532-3p        5          6          4
         83         103 na*                   0          1          0
         20          19 hsa-miR-409-3p       64         47         44
         14          12 cfa-miR-135          52         38         49
         14          12 na*                  52         38         49
         53          37 na*                   0          0          0
         39          46 hsa-miR-1307         29         11         11
         21          26 rno-miR-132          32         34         22
          0           0 rno-miR-101b         46         13         97
          1           0 hsa-miR-339-3p       46         65         42
          0           0 hsa-miR-210          52         43         48
          1           0 hsa-miR-370          51         33         47
          0           0 hsa-miR-760          53         37         37
         19          50 na*                   0          0          0
          0           0 na*                  44          3         58
          0           0 cfa-miR-500          33         27         43
          0           0 cfa-miR-502          33         27         43
                     30           35   rno-miR-493        0    0    2
                      4           13   hsa-miR-181a-2*   26    9   17
                     19           31   na*                0    0    0
                     17           15   hsa-miR-369-3p     8    4    8
                     20           16   hsa-miR-886-3p     1    0    3
                     12           22   hsa-miR-769-3p     3    3    3
                     14           11   hsa-let-7i*        4    6   10
                      2            0   rno-miR-136*      26   12   12
                     20           13   na*                0    0    0
                     15            6   na*                0    0    0
                     13           18   cfa-miR-574        0    0    0
                     15           14   na*                0    0    0
                      4           19   mmu-miR-199a-3p    1    0    0
                      0            0   hsa-miR-375       15   15   11
                     24            9   na*                0    0    0
                     12            9   na*                3    1    1
                      9           12   hsa-miR-182*       0    0    0
                      3            2   na*                8    9    0
                      0            0   hsa-miR-935       14    3    9
                      8            6   na*                0    0    0
                      7            4   hsa-miR-128        1    0    0
                      0            0   hsa-miR-1249       4    7    5
                      0            0   hsa-miR-1258       5    7    4
                      0            0   rno-miR-138*       7    5    3
                      0            0   na*                7    5    3
                      0            0   hsa-miR-1825      10    5    0
                      2            3   na*                0    0    0
                      0            0   hsa-miR-656        5    4    6
                      0            0   hsa-miR-551b       7    2    2
                      2            3   hsa-miR-371-3p     0    0    0
                      1            4   na*                0    3    1
                      2            6   na*                0    0    0
                      6            0   hsa-miR-514        0    0    0
                      7            2   na*                1    0    0
                      1            2   hsa-miR-1277       0    0    0
                      2            1   hsa-miR-654-3p     1    4    1




ch Illumina reads were mapped onto.

e" precursor.

				
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posted:12/3/2011
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